Heatmap: Cluster_683 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra035663 (SMR10)
1.08 -1.9 -0.28 -2.91 0.59 0.52 0.74 0.51 0.72 0.45 1.2 0.38 0.17 1.25 1.05 0.97 0.55 0.61 -0.02 0.65 0.46 -0.81 - - - - - - - - -
Bra037454 (LPA66)
-0.09 -0.13 -0.24 -0.55 -0.47 0.11 0.33 0.46 -0.01 0.54 0.09 0.25 -0.18 0.68 0.44 0.92 0.38 0.12 0.2 0.27 0.06 -0.29 -1.07 -0.59 -0.71 -0.63 -1.13 -0.39 -0.19 -0.36 -0.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.