Heatmap: Cluster_786 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra023744 (ERF1)
-1.1 -1.51 -1.1 -0.71 0.39 0.24 -0.26 0.85 0.17 -0.44 -0.24 0.0 -1.57 -1.15 -1.48 -2.14 -2.82 0.94 -0.22 -1.24 -0.73 -0.2 2.62 -0.24 -1.22 -1.38 -1.24 1.36 0.98 0.05 -1.8
Bra023746 (ERF1)
-1.1 -1.51 -1.1 -0.71 0.39 0.24 -0.26 0.85 0.17 -0.44 -0.24 0.0 -1.57 -1.15 -1.48 -2.14 -2.82 0.94 -0.22 -1.24 -0.73 -0.2 2.62 -0.24 -1.22 -1.38 -1.24 1.36 0.98 0.05 -1.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.