Heatmap: Cluster_734 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001822 (DOF2)
-0.53 -0.43 -0.12 -0.88 0.93 0.8 -0.71 -0.58 0.04 -0.31 -0.1 -0.53 -0.37 0.97 1.29 -0.02 -0.82 0.01 0.22 0.04 -0.62 -0.43 0.28 0.24 -0.19 -0.85 -0.48 -0.13 0.27 -0.46 -0.02
Bra016201 (RR3)
-0.82 -1.82 -0.73 -0.91 1.64 1.16 -1.88 -1.68 0.39 -0.56 -0.5 -0.28 -1.7 1.41 1.6 -1.43 -0.74 -0.21 0.14 0.01 -0.24 -0.29 0.78 -0.35 -0.55 -1.06 -0.72 0.03 0.15 0.35 -1.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.