1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_954 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010654 (TRAPPC12)
 -0.1 0.23 0.04 -0.18 0.29 0.15 -0.21 -0.36 -0.27 -0.11 -0.17 -0.28 -0.07 0.15 0.49 0.15 -0.11 -0.05 -0.11 -0.24 -0.15 -0.11 0.41 -0.19 0.1 0.07 -0.08 -0.0 0.14 -0.03 0.16
Bra010674 (alpha1-COP)
 0.39 0.18 -0.46 -0.26 0.23 -0.1 -0.38 -0.35 -0.82 -0.56 -0.81 -0.34 -0.04 0.07 0.68 0.06 -0.26 -0.04 -0.24 -0.46 -0.56 -0.37 0.89 0.2 0.16 0.17 0.3 0.08 0.17 0.32 0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.