Heatmap: Cluster_669 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra016070 (AtWSCP)
- - - - - -2.94 - - 0.08 -1.2 -1.6 -4.12 -1.0 -1.35 2.7 -1.94 -2.38 4.19 - - - -3.49 1.02 -3.48 -0.87 - -3.51 - - - -4.22
Bra025681 (MYB47)
0.4 -0.78 0.03 -0.66 0.61 -0.57 -1.5 -0.4 -0.36 0.8 -0.85 -1.02 0.02 -0.97 0.65 0.19 -0.66 2.94 -0.88 -0.56 -0.11 -0.36 -1.99 -1.38 -0.81 -0.85 -0.79 -2.56 -0.85 -0.26 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.