Heatmap: Cluster_916 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra031727 (SCM)
-1.58 -0.44 0.85 -0.18 0.33 -0.13 1.05 -1.53 -0.7 -2.5 -0.55 -0.42 0.47 -0.37 0.14 0.36 -1.04 0.9 -0.65 -0.32 -0.3 -3.66 1.77 -0.78 0.58 -0.22 -0.41 -0.81 -0.7 0.09 0.91
Bra031757 (SCM)
-0.39 -0.96 0.15 -0.0 0.72 -0.24 0.73 -0.69 -0.69 -1.62 -0.12 -1.0 1.6 0.2 0.48 0.56 -0.4 0.84 -0.55 -0.54 0.14 -1.86 1.56 -0.67 -0.65 -0.6 -1.12 -0.67 -1.33 -0.8 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.