Heatmap: Cluster_615 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.21 0.21 -0.2 -1.14 1.15 -0.11 -0.91 -1.61 0.23 0.17 0.13 -0.14 -1.55 0.69 0.31 0.11 -0.17 -1.1 -0.15 -0.54 -0.91 -0.23 2.62 -0.95 -0.84 -1.01 -1.02 -0.6 -0.56 -0.4 -1.19
Bra026795 (PCR2)
0.79 0.69 1.13 0.76 1.41 -0.96 -2.94 -1.69 -1.06 -0.17 -4.17 -1.18 -2.11 -0.22 0.71 -0.28 -0.57 -3.02 -2.58 -2.51 -0.19 -0.75 3.39 -2.85 -5.09 -1.33 -3.04 -3.77 -3.5 -0.37 -5.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.