Heatmap: Cluster_891 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017450 (MPK17)
-0.27 -0.79 0.11 -0.42 0.37 0.58 0.29 0.39 0.32 -0.08 -0.05 -0.01 -0.28 0.72 0.88 0.48 0.13 -0.1 0.19 0.18 -0.12 -0.1 -0.64 -0.6 -0.58 -0.98 -0.66 -0.37 -0.27 -0.47 -0.01
-2.13 -1.91 -1.03 -0.51 0.76 0.76 0.22 0.96 0.22 0.09 0.78 0.82 0.27 1.53 1.25 0.99 0.7 -0.64 0.96 0.53 -0.17 -0.43 -2.47 -2.44 -3.75 -3.29 -2.63 -2.56 -2.45 -2.01 -4.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.