Heatmap: Cluster_543 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra002705 (LSB1)
-2.25 -1.41 -0.83 -2.68 -0.05 -1.09 -0.71 -0.85 0.32 0.42 0.77 0.38 0.41 0.06 0.6 0.4 0.35 0.8 0.27 -0.07 -1.27 0.0 2.11 -0.24 0.06 -0.98 -0.47 -1.63 -1.12 -0.61 -0.29
Bra002707 (LSB1)
-2.25 -1.41 -0.83 -2.68 -0.05 -1.09 -0.71 -0.85 0.32 0.42 0.77 0.38 0.41 0.06 0.6 0.4 0.35 0.8 0.27 -0.07 -1.27 0.0 2.11 -0.24 0.06 -0.98 -0.47 -1.63 -1.12 -0.61 -0.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.