Heatmap: Cluster_411 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra008342 (PGM)
0.15 -0.29 -1.2 -0.51 -0.89 -0.17 0.08 0.35 -0.42 -0.06 0.35 -0.19 1.34 -0.83 0.47 0.55 -0.04 0.25 -0.14 0.47 0.72 0.34 0.5 -0.12 0.02 -0.42 -0.4 -0.96 -1.44 -0.64 -0.62
Bra027030 (VI1)
-1.77 -0.97 -1.26 -0.56 -2.36 -0.03 0.24 0.39 -0.33 0.03 0.49 0.23 1.29 0.24 0.15 0.62 -0.09 0.98 0.15 0.44 0.82 0.45 0.54 -0.75 -0.35 -0.38 -0.6 -0.98 -0.74 -1.91 -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.