Heatmap: Cluster_372 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013746 (ACIP1)
-3.32 0.01 -0.01 -3.35 -0.62 1.33 -1.75 -0.79 -1.99 -0.25 -1.5 -0.46 0.26 1.33 0.5 0.45 -1.24 -1.61 1.09 0.39 -1.71 -0.29 1.54 0.37 0.05 -0.79 -0.22 -1.64 0.49 0.53 -0.08
Bra030394 (PFK5)
-1.27 0.29 0.2 -1.91 -0.0 1.05 -2.1 -0.97 -0.04 -0.13 -0.85 -0.23 0.58 1.07 0.57 1.02 -0.46 -0.78 0.26 0.17 -0.94 -0.89 0.41 0.2 -0.43 -0.42 -0.56 -0.45 0.63 -0.12 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.