Heatmap: Cluster_621 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010132 (ARR6)
-0.11 0.25 -0.46 0.67 -1.42 -0.51 -0.59 0.35 -0.58 -0.82 0.19 -0.38 0.78 -1.45 -2.28 -0.41 0.66 -1.18 -1.35 -1.07 -0.19 -0.9 0.13 0.91 0.85 0.99 0.48 0.41 -0.38 0.27 0.68
Bra025708 (ARR7)
-0.41 -0.21 -0.47 0.83 -1.2 -0.38 -0.28 0.73 -0.22 -0.81 -0.68 -0.33 1.07 -1.17 -2.07 0.25 0.79 -0.42 -0.94 -1.01 -0.04 -0.7 0.81 0.62 0.52 0.22 0.13 0.09 -0.29 0.07 0.47

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.