Heatmap: Cluster_809 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.42 0.5 0.65 -0.43 1.23 0.74 -0.55 -0.43 1.1 -0.33 1.28 1.4 0.01 0.25 1.47 0.71 -1.97 0.88 0.49 0.88 -0.59 -1.56 -3.18 -4.04 - - - - - - -
Bra038875 (PLP3a)
-0.09 -0.0 0.59 -0.17 0.52 -0.07 -0.34 -0.25 0.32 -0.01 0.3 0.17 0.1 0.4 0.52 -0.37 -0.43 0.26 0.17 0.28 -0.25 -0.03 -0.56 -0.33 -0.26 -0.69 -0.61 0.12 0.07 -0.23 -0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.