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Heatmap: Cluster_798 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010801 (MadA3)
 - -1.33 -1.39 -1.68 1.38 -0.74 0.2 0.45 0.17 -1.72 0.17 0.35 0.93 -0.48 0.12 -0.84 0.29 0.08 -0.82 0.38 1.57 -0.21 -0.67 0.62 - - -2.53 0.74 1.16 0.22 -0.52
Bra017365 (ST)
 - -1.12 -3.26 - 0.35 1.45 -0.06 0.22 0.67 0.65 0.47 -2.1 0.28 0.13 0.14 1.36 -0.06 1.84 -0.33 -0.34 0.62 0.86 1.1 -0.06 -2.13 -2.09 -3.13 - -1.3 - -
0.01 -0.17 0.11 -0.31 0.48 0.97 0.86 0.25 -0.7 -0.6 0.32 -2.07 0.71 -0.88 0.49 -1.16 -0.51 -0.56 -0.58 0.1 -0.07 -0.43 0.6 0.23 -0.03 -0.61 0.08 -0.15 -0.14 -0.5 0.44
Bra034046 (BPP2)
 -0.65 -0.59 -0.2 -0.15 -0.32 0.6 0.61 -0.12 -0.53 -0.44 0.17 -0.75 0.42 -0.46 0.65 -0.01 -0.32 0.96 -0.19 0.35 0.16 -0.12 0.44 -0.2 0.06 -0.41 0.15 -0.55 -0.33 -0.53 0.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.