Heatmap: Cluster_434 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-3.13 -0.85 -0.3 -1.29 -0.99 -0.88 -0.07 -0.36 -0.09 0.12 -1.3 -0.39 1.02 -0.62 -0.1 -0.84 -0.04 -0.25 -0.46 -0.56 -0.43 -0.1 1.19 1.0 1.06 0.79 0.08 0.05 0.39 0.32 0.38
Bra033550 (DMS13)
-2.19 -1.35 -0.28 -2.63 -1.92 -3.37 0.48 -0.29 -0.02 -0.55 -0.39 -0.78 0.61 0.08 0.92 -1.7 -0.19 0.37 -0.71 -0.84 -1.21 -0.31 1.44 0.94 0.6 1.0 -0.03 0.04 -0.0 0.32 1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.