Heatmap: Cluster_584 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.1 -3.09 -0.02 -2.5 0.38 -0.35 0.41 -1.5 -3.45 0.14 -0.37 0.14 1.1 -0.05 0.69 0.29 -0.26 1.54 -1.06 0.11 0.86 0.09 1.61 - -1.57 -0.06 -0.26 0.19 0.23 -0.5 -1.61
Bra016182 (MLP28)
-2.16 -3.35 -0.76 -0.94 -0.06 -0.06 0.07 -0.94 -0.59 0.87 -1.53 1.27 1.39 -0.76 -0.81 0.77 -0.2 1.51 0.44 0.52 0.24 -0.12 1.91 -0.76 -0.87 -1.41 -1.82 -1.93 -1.14 -2.23 -2.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.