Heatmap: Cluster_958 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra030778 (SUMM2)
0.62 0.8 0.57 0.94 0.95 0.7 0.13 0.05 0.37 0.08 -1.34 -0.69 0.07 -1.65 0.06 -1.21 -0.47 -0.5 0.04 0.44 0.17 0.05 -1.83 -0.6 -0.48 -0.39 0.2 - -0.35 0.28 -0.18
Bra030779 (SUMM2)
-0.55 0.33 -1.0 0.52 0.51 0.33 0.56 0.31 0.42 -0.12 -1.11 -0.91 -0.04 -1.6 0.93 -0.89 -0.15 -0.13 0.41 0.7 0.33 0.35 -1.84 -0.18 -0.37 -0.29 0.41 - 0.02 0.3 0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.