Heatmap: Cluster_812 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001283 (MAN1)
0.25 -1.05 -1.62 -2.65 0.4 0.73 0.47 -1.0 0.05 -0.38 -0.46 0.17 0.97 -0.75 0.36 -0.72 0.03 -0.32 -0.82 -0.88 -0.06 -3.18 1.55 0.62 -0.39 -0.63 -0.66 0.8 0.6 0.43 -0.37
Bra040047 (MAN1)
0.86 -1.5 -2.38 - 0.94 -0.36 -2.15 -3.58 -0.09 -0.24 -0.14 -0.05 1.05 -3.6 -1.05 -3.68 -1.63 -0.52 -0.67 -2.11 0.33 -4.58 1.49 1.33 0.51 0.11 -0.39 1.47 0.98 1.06 -0.64

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.