1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_469 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra025796 (CRSP)
 2.95 1.71 1.06 1.23 - - -0.18 0.9 - -1.05 1.17 - 2.25 - -0.71 - - - - -12.17 - - - - - 1.99 - -0.35 - - -14.89
Bra026562 (ICU2)
 1.83 1.49 -0.53 1.28 -1.53 - 1.05 -1.56 -3.85 -0.48 -1.2 -2.26 -0.62 -1.48 -2.14 -0.92 -1.91 -1.5 - -2.91 -1.71 - 0.99 1.1 0.61 -0.11 -0.08 0.78 0.95 0.53 0.92
2.69 1.68 1.46 0.72 - - - - - - -0.68 - 0.85 - - - - - - - - - 1.31 1.22 -0.27 0.61 0.69 - -0.44 1.04 1.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.