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Heatmap: Cluster_464 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra023553 (MAGL15)
 -0.08 0.05 0.51 0.28 -0.46 -0.42 -0.12 0.11 -0.69 -0.74 -0.63 -0.87 0.81 -0.12 0.14 0.19 -0.35 0.41 -0.26 -0.56 -0.31 -0.37 1.63 -0.19 -0.16 0.13 -0.14 -0.06 -0.25 -0.65 0.1
Bra028590 (RPS6B)
 0.06 0.39 0.34 0.46 0.01 -0.2 -0.23 0.35 -1.28 -1.2 -1.1 -0.78 0.84 -0.24 -0.18 0.33 0.13 0.13 -0.99 -0.55 -0.33 -0.93 2.07 -0.42 -0.38 -0.12 -0.35 -0.34 -0.92 -0.48 0.23
Bra038689 (AML1)
 -0.56 0.48 0.44 0.52 -0.26 -0.57 -0.16 0.67 -2.44 -0.76 -1.25 -1.41 0.92 0.11 0.05 -0.09 -0.35 0.44 -1.27 -1.23 -0.89 -0.52 2.26 -0.15 0.1 -0.04 -0.18 -0.36 -1.48 -1.18 0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.