Heatmap: Cluster_397 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - - - - 0.03 0.1 1.17 1.42 - -0.91 -0.21 0.96 0.41 2.21 0.94 0.97 1.25 0.93 -1.75 1.18 1.98 - - - - - - - - -
Bra040713 (PAF2)
0.06 -0.35 0.11 -1.27 -0.38 0.06 0.41 0.87 -0.31 -0.31 -1.1 0.45 1.02 0.98 1.63 0.97 -0.48 -0.32 -0.16 0.01 -0.17 -0.05 -0.93 -1.23 -0.72 0.2 -1.11 -2.37 -0.42 -0.74 -2.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.