Heatmap: Cluster_585 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra009478 (PKS4)
-0.66 0.54 0.96 -0.13 -0.26 -0.36 -1.1 -2.22 -0.16 -1.02 0.26 -0.83 1.65 -2.19 -0.42 0.28 -1.0 -0.15 0.17 0.55 -0.23 -0.56 2.53 -1.89 -2.92 -0.22 -1.22 -0.4 -0.4 -0.8 -2.32
Bra009479 (ACA3)
-0.66 -0.0 0.31 -1.39 -0.8 -2.06 -0.16 -1.13 0.01 -1.16 0.47 -0.65 1.23 -1.51 -1.16 0.42 -1.49 0.21 0.07 0.56 0.81 -0.09 2.21 -0.17 0.3 0.09 -0.0 -1.01 -0.92 -0.4 -1.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.