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Heatmap: Cluster_408 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006799 (YRE)
 -0.19 -0.09 -0.2 0.11 -0.16 -0.54 -1.22 0.23 -0.29 -0.14 0.26 -0.23 -0.0 0.22 0.79 -0.72 0.5 -0.11 -0.57 -0.26 0.13 -0.63 -1.93 0.17 0.18 0.5 0.21 -0.07 0.6 0.17 0.6
Bra006801 (YRE)
 -2.62 -1.48 - -0.94 -0.92 0.01 -0.51 -0.06 0.24 1.09 0.82 0.06 0.02 -0.25 1.04 -0.12 0.89 1.27 0.2 -0.33 0.35 0.9 -1.99 - 0.4 -1.01 -1.13 0.76 0.49 -0.23 -
Bra008223 (sks18)
 0.24 -0.69 - - - -0.24 - -0.92 - 1.07 -0.29 1.34 - -1.08 1.65 1.07 2.11 1.06 1.55 1.18 - - - 1.88 - -1.16 - - - -0.09 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.