Heatmap: Cluster_796 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra017281 (JMJ15)
- - - - - - - - - - - - - 3.62 - - - 4.22 - - - - - - - - - - - - -
Bra017654 (SUC1)
- - - - - 1.49 - 1.36 - - - - - 2.81 - - - 4.22 - - - - - - - - - - - - -
- - - - 1.14 - - 0.85 - - -0.52 - - 2.17 - - - 3.18 0.4 - 0.62 - 2.0 - - - 1.59 - 0.53 - 0.45
- - 2.55 1.41 - 0.87 - 0.76 - - - - - - - - - 4.06 - 1.15 - - - - - - - - - - -
0.97 1.03 - 0.6 - - - - - - - - 0.14 1.86 1.36 - -0.12 3.22 - - 0.01 - 2.59 - - - - - -0.16 - -
Bra039878 (UFO)
- - 3.05 - - - - - - - - - - 2.79 - - - 3.98 - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.