Heatmap: Cluster_359 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra027302 (LIK1)
0.66 -0.4 0.46 0.57 -0.5 0.02 -0.2 0.05 0.09 -0.06 -0.57 0.07 -0.74 -1.06 -2.0 -0.48 -0.81 -0.97 -0.07 0.42 0.5 -0.11 -1.48 0.23 0.52 0.33 0.69 0.69 0.67 0.22 -1.04
Bra027307 (LIK1)
0.71 -0.92 0.72 0.54 -0.6 -0.1 -0.77 -0.03 -0.54 -0.08 -0.49 -0.35 -1.88 -0.45 -2.13 -0.6 -1.43 -0.37 0.38 0.05 0.33 0.46 -0.61 0.37 0.82 0.49 0.6 0.68 0.4 0.56 -1.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.