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Heatmap: Cluster_283 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
1.71 - 1.7 - -12.94 - - 2.15 - 1.24 - - -0.05 - 1.52 1.2 - 1.98 - - 2.36 1.32 - - - - - - - - -
1.08 0.72 - - -1.31 -0.26 0.64 -1.29 -1.4 0.23 -1.37 -1.36 -0.07 0.44 - 1.81 0.83 2.19 0.66 1.14 1.37 - - -1.35 - -1.3 - 0.53 - - -0.11
-0.02 1.48 - - - - 0.67 0.33 2.03 -1.3 1.71 - -0.14 - 1.33 1.59 0.87 1.41 - - 1.45 1.44 - - - -2.95 -2.75 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.