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Heatmap: Cluster_349 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra010590 (BURNOUT1)
 1.6 1.6 1.64 1.31 0.3 0.2 -0.74 -0.32 -0.6 -1.72 -0.77 -0.72 0.03 0.45 0.85 -1.01 -0.11 -0.16 -1.31 -0.46 -0.82 -1.79 0.03 -0.79 -1.05 -1.51 -2.69 -0.59 -0.86 -1.17 -0.59
Bra022360 (RAB7B)
 0.91 1.04 0.93 0.72 0.52 0.32 -0.37 -0.08 -0.38 -0.08 -0.26 -0.39 -0.39 0.1 0.44 -0.42 -0.55 -0.02 -0.3 -0.15 -0.56 -0.63 -0.04 -0.48 -0.41 -0.13 -0.56 -0.31 -0.16 -0.43 -0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.