Heatmap: Cluster_742 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.09 -0.84 -0.78 0.03 0.29 -0.16 -0.14 -0.99 0.14 0.11 0.32 -0.21 0.45 -0.03 0.75 -0.71 0.41 0.41 -0.6 -0.27 -0.52 -0.82 0.19 -0.35 0.16 0.37 -0.49 0.28 0.21 0.29 0.34
-2.57 - -2.67 - 0.7 -0.71 0.32 -2.0 0.73 -1.98 0.05 -0.0 1.0 0.55 0.95 0.91 -0.62 0.26 -0.93 - -0.04 0.16 0.62 -3.13 0.7 -0.43 -0.37 -0.17 1.29 0.32 0.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.