Heatmap: Cluster_309 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000930 (iqd17)
-0.03 -0.46 0.09 -1.16 -0.43 -0.86 -1.03 -0.95 -0.39 -0.09 -0.45 -0.25 1.02 0.22 -0.21 -0.38 -0.49 1.16 -0.57 -0.65 -0.41 -0.7 0.99 -0.09 -0.12 -0.05 0.13 0.31 0.77 0.38 0.69
Bra005181 (PEAR1)
-1.21 -1.0 -2.7 -0.66 -1.06 -2.62 0.07 -1.35 0.11 -0.68 -0.79 -0.48 1.24 1.12 -0.11 -0.28 -1.34 1.62 -0.34 -1.2 0.14 -1.03 1.65 0.04 0.2 -0.72 -1.23 0.19 0.59 -0.1 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.