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Heatmap: Cluster_768 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.05 1.05 0.6 0.59 1.27 0.9 -0.67 -0.85 -0.48 -2.01 -1.11 -0.25 0.11 -1.0 0.04 0.63 -2.22 0.65 0.0 -1.43 -0.13 -0.58 -0.21 0.25 -1.36 0.62 -0.94 -0.39 -0.2 -0.55 0.52
Bra013767 (GRF8)
 0.3 0.88 0.95 0.13 1.52 0.56 -0.79 -0.47 -1.07 -1.86 -1.73 -2.22 0.08 -0.9 0.14 0.59 -0.89 1.34 0.45 -0.03 0.12 -0.4 0.09 -0.03 0.14 -1.02 -1.2 -0.92 -1.42 -1.7 0.3
Bra032498 (MEE4)
 -0.48 0.52 0.85 0.11 1.08 0.52 -0.27 -0.54 -0.11 0.45 -1.07 -0.9 0.58 -0.3 0.45 -0.15 -0.01 0.65 -1.26 -0.55 -0.43 -0.25 0.3 -0.46 -0.05 -0.58 -0.82 -0.07 -0.41 -0.02 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.