1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_839 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001477 (BRG3)
 0.48 0.27 0.29 -0.91 0.76 0.72 -0.1 -1.42 -0.31 -0.45 -0.0 -0.71 -1.24 0.18 -0.02 -0.17 -0.71 -0.13 0.31 0.24 -0.15 -0.13 -0.38 0.66 0.56 0.13 0.21 0.12 0.41 -0.67 -0.92
0.02 0.21 0.72 -0.42 1.38 1.01 -0.83 -0.36 -0.44 -0.38 -0.38 -0.86 -0.54 0.17 0.42 0.21 -1.72 0.01 0.34 -0.03 -0.63 -0.65 0.4 0.54 0.26 -0.43 0.31 -0.44 -0.36 -1.04 -0.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.