Heatmap: Cluster_928 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.21 -0.13 -0.42 -0.45 0.43 1.17 0.33 0.43 0.84 -0.15 0.59 -0.54 -0.02 0.92 -0.12 0.09 -0.19 -0.67 0.55 0.79 0.02 0.41 -0.29 -0.78 -1.3 -2.22 -0.84 -1.09 -1.01 -0.9 -1.38
Bra038372 (CTC1)
-0.34 -0.43 -0.19 -0.36 0.7 0.79 0.39 0.23 -0.31 -0.22 0.27 -0.68 0.15 0.06 0.5 0.46 -0.01 0.37 0.63 0.16 -0.14 -0.12 -0.28 -0.14 -0.66 -0.48 -0.3 -0.18 -0.28 -0.71 -0.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.