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Heatmap: Cluster_857 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006562 (AL5)
 0.13 1.43 1.57 1.37 - -3.75 0.22 1.53 -3.13 0.14 -0.38 -0.81 0.97 -4.87 -3.32 0.84 -1.59 0.1 -1.25 -0.72 -1.79 -1.3 -1.09 -0.59 -0.22 0.23 0.38 0.09 -1.58 -0.45 0.43
Bra016813 (ADT1)
 0.17 0.85 0.6 0.76 -0.42 -1.4 -0.1 0.58 -0.31 -0.02 -0.27 0.37 0.34 -2.29 -1.73 -0.4 -0.57 -0.1 -0.69 -0.74 -0.83 -0.79 0.35 0.16 0.08 0.38 0.0 0.69 0.22 0.45 0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.