Heatmap: Cluster_345 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.28 0.08 0.49 0.42 0.91 -0.1 -0.05 -0.27 -0.05 0.28 -0.12 -0.14 -0.31 0.12 0.06 0.05 -0.01 0.1 -0.54 0.15 -0.24 0.04 0.1 -0.3 -0.32 -0.21 -0.18 -0.2 -0.09 -0.3 0.01
Bra022257 (SCN1)
- 0.45 1.98 1.49 2.54 0.58 - -1.3 - -0.62 -2.34 -2.33 - - -2.03 0.59 -2.03 -0.71 - - 0.14 0.29 0.13 0.35 -1.93 -0.21 -2.07 -2.03 0.56 1.03 0.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.