Heatmap: Cluster_722 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.7 -0.99 -0.39 -0.71 -1.62 -2.6 0.64 0.88 0.64 -0.2 0.44 0.02 -1.07 -1.12 -0.23 0.24 -0.14 0.34 0.38 0.28 0.2 -0.58 -3.97 0.03 -0.01 0.14 0.13 -0.97 0.68 0.13 1.51
Bra019187 (MSRA4)
-0.62 0.33 -0.88 0.15 -1.12 0.03 0.72 0.43 0.45 0.36 0.37 0.31 0.66 -1.16 -0.8 -0.01 -0.04 0.61 -0.07 0.3 -0.05 -0.13 -1.39 -0.62 -0.82 -1.03 -0.7 -0.52 0.17 -0.54 1.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.