Heatmap: Cluster_597 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006887 (ASAT1)
0.01 -1.83 -2.07 1.0 0.17 1.05 -0.02 0.49 -0.93 0.24 0.65 0.39 -0.59 -2.9 -4.02 -0.99 0.95 -2.71 0.19 0.24 -0.45 -1.0 -0.72 0.28 0.48 0.05 -0.14 -0.51 0.49 0.16 0.94
Bra015439 (APH-1)
-1.21 -0.23 -1.31 - -0.53 1.51 - -0.03 0.8 1.16 0.96 1.73 1.6 0.31 - -0.28 1.27 - -0.62 - - -0.56 - -0.03 0.2 - 0.26 - 1.76 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.