Heatmap: Cluster_530 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.87 1.34 1.69 1.18 0.69 0.04 -1.1 -0.26 -0.3 -1.13 -0.33 -0.14 -1.85 0.15 0.42 -1.34 -0.97 -0.05 -0.27 -0.03 -1.0 -0.77 0.83 -1.12 -1.1 0.02 -1.52 -0.73 -0.49 -0.36 -0.79
Bra034165 (VFP3)
0.92 0.85 1.45 0.95 0.48 0.22 -0.47 -1.01 -0.0 0.0 -0.62 -0.17 -0.75 -0.01 0.46 -0.51 -0.64 -0.34 -0.44 -0.29 -0.45 0.44 0.42 -0.77 -0.83 -0.41 -1.12 -0.78 -0.73 -0.12 -0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.