Heatmap: Cluster_501 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.57 -1.87 -2.85 -1.33 -0.72 0.31 -0.1 -1.04 0.24 -0.25 0.8 0.93 -1.05 -0.04 -0.19 0.22 -1.37 0.28 -0.08 0.98 0.18 -0.07 0.03 0.27 0.85 0.16 0.3 0.22 0.81 -0.61 -0.19
- -2.67 - - -1.74 0.59 0.16 -0.69 -0.84 0.19 -1.26 0.45 - -0.24 0.96 1.16 -0.15 -1.31 -0.33 0.48 0.69 0.07 - 0.16 1.72 -0.07 1.36 0.59 1.33 -0.84 -2.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.