Heatmap: Cluster_835 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001262 (ADT2)
0.03 0.02 0.02 -1.3 0.62 0.57 -0.69 -0.64 -0.21 -0.67 -0.01 0.64 -0.73 0.91 1.08 -0.08 0.24 1.16 0.6 0.51 -0.08 0.42 -0.05 -1.07 -1.69 -2.06 -0.97 -1.75 -0.54 -0.4 -0.33
Bra026867 (VIK)
0.28 0.46 0.25 -0.31 0.35 0.39 -0.6 -0.1 0.12 0.1 0.25 0.12 -1.07 0.67 0.77 -0.06 -0.64 0.93 0.47 0.01 -0.02 0.13 0.34 -1.05 -1.09 -1.23 -0.97 -0.31 -0.24 -0.31 -1.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.