Heatmap: Cluster_637 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra018925 (PR5K)
-0.26 0.21 0.56 -0.14 0.11 0.63 -1.2 -2.01 0.15 -0.99 -0.34 -0.57 0.72 0.37 0.59 0.1 0.18 0.94 -0.51 -0.17 -0.84 -0.04 2.26 -1.47 -1.67 -0.87 -1.79 -0.48 -1.03 -0.62 -1.27
-0.1 0.41 0.26 -0.1 0.28 0.0 -0.41 -0.43 -0.35 -0.61 -0.32 -0.52 0.63 0.15 0.02 -0.18 -0.2 0.41 0.28 -0.25 0.25 0.18 1.64 -0.43 -0.39 -0.51 -0.65 -0.35 -0.66 -0.72 -0.26
Bra034657 (MTN2)
-0.41 1.13 0.24 -0.46 0.14 0.15 -0.48 -0.14 -0.39 -0.16 -1.18 -0.59 0.89 0.1 0.18 0.28 0.01 0.01 -0.2 -0.26 0.3 -0.03 1.99 -1.01 -0.39 -1.67 -0.84 -1.73 -0.67 -0.94 -0.38
Bra034660 (MTN2)
-0.41 1.13 0.24 -0.46 0.14 0.15 -0.48 -0.14 -0.39 -0.16 -1.18 -0.59 0.89 0.1 0.18 0.28 0.01 0.01 -0.2 -0.26 0.3 -0.03 1.99 -1.01 -0.39 -1.67 -0.84 -1.73 -0.67 -0.94 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.