Heatmap: Cluster_560 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
1.29 1.0 0.45 -0.44 1.69 0.38 -0.26 -0.63 -0.16 -0.38 -0.94 -0.07 -1.18 -1.13 0.04 -0.32 -0.92 -0.3 -0.73 -1.01 -0.69 -0.79 1.39 -1.24 -0.46 -0.48 -0.41 -0.3 -0.12 0.26 -0.4
Bra038519 (PFK5)
0.71 0.44 0.03 -0.19 1.01 0.59 -0.5 -0.93 0.02 -0.4 -0.09 0.26 -0.58 -0.15 0.2 0.01 -0.38 -0.35 -0.46 -0.79 -0.13 -0.42 1.32 -0.24 -0.19 -0.09 -0.35 -0.02 -0.17 -0.55 -0.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.