Heatmap: Cluster_433 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra009569 (APD7)
1.38 1.31 1.85 0.66 1.35 -2.44 -2.21 -0.86 -0.4 -0.68 -0.1 0.32 -0.8 -1.68 -1.86 -1.3 -0.8 0.88 0.25 1.48 1.05 0.22 -4.96 -1.57 -2.19 -2.21 -1.44 -1.21 -1.08 -1.59 -3.57
Bra020334 (RABA2D)
0.65 0.87 1.17 0.21 0.66 0.31 -0.18 -0.28 -0.11 0.64 -0.07 -0.26 -1.17 0.28 0.05 -0.57 0.1 -0.49 0.04 0.04 0.31 0.2 -0.19 -0.61 -1.0 -0.22 -0.62 -0.43 -0.54 -1.35 -1.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.