Heatmap: Cluster_877 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra007459 (SYN3)
- -1.58 0.19 -0.92 -1.61 -2.9 -0.4 -0.59 -0.13 0.03 0.18 -0.56 2.03 -1.16 -1.53 0.66 0.33 0.76 -0.85 0.1 -0.27 0.68 1.56 -0.48 0.75 -0.38 0.12 -0.16 -2.62 -0.44 -0.14
Bra022834 (CDT1)
-1.81 -0.62 -0.17 -0.57 -2.14 -2.66 -0.24 -0.88 -0.85 -0.15 0.05 -0.02 2.0 -2.12 -0.16 0.56 0.34 0.95 -1.08 -0.55 0.2 -0.28 1.26 0.11 0.72 -0.39 0.02 0.07 -2.1 -0.09 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.