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Heatmap: Cluster_343 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra018492 (CRK39)
 -0.2 -0.81 -0.15 -1.59 0.3 1.73 0.64 -0.24 0.08 0.35 0.21 0.51 -1.46 1.59 1.66 0.42 -0.21 -1.62 0.28 0.16 0.29 0.63 -4.28 -1.79 -2.14 -2.43 -1.78 -1.58 -1.04 -1.5 -3.48
Bra018493 (CRK39)
 0.16 -0.69 0.22 -1.0 0.27 1.7 0.8 -0.35 -0.28 -0.02 -0.2 0.22 -1.53 1.36 1.64 0.2 -0.19 -1.8 0.24 0.23 0.54 0.83 -2.18 -1.66 -2.92 -2.21 -1.6 -1.27 -0.66 -1.34 -2.44
-0.04 -0.39 0.07 -0.39 0.47 0.72 -0.03 -0.07 -0.09 -0.06 0.11 0.18 -0.04 0.89 0.88 0.31 0.09 -0.03 0.13 0.33 -0.08 0.06 -1.69 -0.49 -0.49 -0.56 -0.17 -0.26 -0.61 -0.72 -0.54

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.