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Heatmap: Cluster_391 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra006030 (DAU2)
 1.58 - - - 1.89 0.22 -0.88 -0.94 - -0.77 - - 1.76 0.34 - 1.41 - - -0.62 - - 2.86 - - - 0.77 0.21 0.52 - -0.76 0.45
1.22 0.66 -1.23 - -0.62 0.48 -3.12 -2.14 -1.1 - -0.08 0.75 0.66 1.8 0.02 0.98 -2.86 -0.87 -0.08 -0.89 -3.03 1.48 -0.37 -0.04 -0.52 1.13 0.31 -0.53 -0.55 -0.34 -
Bra040385 (LDA)
 1.77 - - - 1.99 1.25 - - - - - - - 0.63 2.15 - - 0.54 - 0.39 - 1.74 - 0.31 - 1.28 0.28 - - 1.46 0.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.