Heatmap: Cluster_503 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.88 - -1.3 - 0.19 -0.11 -1.04 -3.02 -0.14 1.65 0.38 -0.6 - 0.64 1.48 - 0.6 2.27 1.66 -0.6 -1.79 -0.68 0.46 -0.15 -3.23 - -3.3 0.6 -0.29 -0.33 -1.5
-0.42 -0.21 -0.06 -0.4 0.08 -0.22 -0.49 -0.46 -0.16 0.13 0.17 -0.13 0.16 0.11 0.19 0.1 -0.1 0.75 0.72 -0.12 -0.18 -0.05 0.16 0.12 0.07 0.08 0.22 -0.18 -0.4 -0.2 -0.19
Bra033146 (CP2)
-1.69 -1.75 -1.07 -1.86 1.08 -0.48 -2.68 -2.12 0.04 0.85 0.51 0.58 -0.18 -1.51 -0.12 -0.4 0.68 2.03 1.06 -0.71 -0.74 -0.27 1.14 -0.96 -0.44 -0.3 -0.14 -1.88 -1.74 0.63 -0.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.