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Heatmap: Cluster_943 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra032068 (AtFDA3)
 -1.01 -0.33 -0.64 -0.07 0.64 -0.13 -0.71 -0.33 0.29 -0.36 -0.05 -0.23 -0.56 0.58 1.67 0.4 -0.23 0.97 0.08 -0.08 -1.31 -0.25 1.44 -1.39 -0.59 -0.97 -0.78 -0.68 -1.36 -0.32 0.03
Bra032069 (AtFDA3)
 0.13 -0.08 -0.04 -0.17 0.73 0.51 -0.36 -0.24 -0.46 -0.54 -0.23 -0.46 -0.53 0.45 1.15 0.25 -0.23 0.35 -0.21 -0.47 -0.5 -0.43 0.91 -0.2 -0.18 -0.84 -0.0 -0.15 0.06 -0.4 -0.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.