Heatmap: Cluster_774 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
2.19 - - -0.77 -1.22 - 0.14 - - -0.16 -0.37 - - 1.58 0.11 1.64 - -0.95 -1.04 -1.11 -1.14 0.81 2.94 - - -0.82 - -0.94 1.36 - -1.04
Bra017166 (ACT1)
- -0.78 0.14 0.94 -1.66 0.07 -1.88 -0.35 -2.91 -2.71 -1.33 -0.71 1.44 1.5 -0.15 0.99 - 0.79 -0.73 - -1.09 0.82 2.09 1.59 -2.42 -0.9 -0.75 0.12 -2.48 -0.63 -2.53
Bra021126 (LEA29)
0.62 - 0.82 0.18 -0.08 -3.3 1.4 -0.45 -1.4 -2.29 -1.07 -0.78 1.47 2.23 -2.1 1.39 -2.24 -0.26 0.95 -0.63 -1.67 -0.96 2.49 - - - - - - - -3.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.