Heatmap: Cluster_347 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- -2.43 -3.74 - -4.84 - -0.71 - 0.03 -3.28 -1.93 -0.19 -3.7 1.56 1.74 -0.43 - -0.54 -0.97 -0.5 0.38 0.22 2.18 0.59 1.13 0.12 0.78 0.44 -0.01 -0.17 1.06
Bra017647 (XLG2)
- - - - - - - - -7.27 -0.37 0.05 -0.41 - 0.3 1.7 1.15 0.37 0.25 0.41 - -0.97 -0.35 1.76 0.67 0.71 0.55 0.84 0.75 1.11 0.49 0.58
-5.99 -4.43 - -4.96 -1.55 -0.8 0.46 0.54 -0.57 -2.02 -1.58 -0.35 -1.23 0.17 0.8 -2.19 -2.21 -0.92 -0.3 0.04 0.34 -0.81 1.28 1.16 0.97 0.04 0.72 0.95 1.39 0.82 0.67
Bra026051 (CLH2)
-1.38 -1.92 - -2.11 -0.09 -0.49 -1.56 -0.65 -0.76 -1.01 0.13 -0.63 0.2 0.39 0.77 -1.29 -0.48 1.26 -0.52 0.55 0.15 0.01 1.65 0.43 0.12 -1.36 0.41 0.4 0.29 -0.12 0.95
Bra030938 (SNL1)
-2.25 -1.13 -0.57 -1.74 -0.12 -1.19 -0.19 -0.35 -0.58 -1.24 -1.59 -0.24 0.08 0.94 0.83 -0.42 -0.64 -0.21 -0.21 0.41 -0.15 -0.26 1.4 0.83 0.72 0.07 0.29 0.01 0.52 0.14 0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.