Heatmap: Cluster_702 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001648 (REM22)
-2.31 -0.73 0.42 -0.21 0.37 1.1 0.16 0.79 -1.74 - -0.09 -0.39 1.21 -1.48 1.51 0.73 0.96 1.13 0.63 0.16 0.32 0.04 0.45 - -1.73 - -0.15 -2.51 - - -0.52
Bra003586 (SL2)
-1.17 -1.09 -2.78 -1.68 -1.04 1.68 1.42 0.06 -0.4 -1.1 -1.05 -0.81 0.98 -0.17 -1.16 1.04 0.58 1.23 1.28 0.54 0.5 0.14 0.59 -0.92 -3.08 -0.5 -0.82 -2.75 -2.85 -1.43 -1.89

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.